Transformer has achieved impressive successes for various computer vision tasks. However, most of existing studies require to pretrain the Transformer backbone on a large-scale labeled dataset (e.g., ImageNet) for achieving satisfactory performance, which is usually unavailable for medical images. Additionally, due to the gap between medical and natural images, the improvement generated by the ImageNet pretrained weights significantly degrades while transferring the weights to medical image processing tasks. In this paper, we propose Bootstrap Own Latent of Transformer (BOLT), a self-supervised learning approach specifically for medical image classification with the Transformer backbone. Our BOLT consists of two networks, namely online and target branches, for self-supervised representation learning. Concretely, the online network is trained to predict the target network representation of the same patch embedding tokens with a different perturbation. To maximally excavate the impact of Transformer from limited medical data, we propose an auxiliary difficulty ranking task. The Transformer is enforced to identify which branch (i.e., online/target) is processing the more difficult perturbed tokens. Overall, the Transformer endeavours itself to distill the transformation-invariant features from the perturbed tokens to simultaneously achieve difficulty measurement and maintain the consistency of self-supervised representations. The proposed BOLT is evaluated on three medical image processing tasks, i.e., skin lesion classification, knee fatigue fracture grading and diabetic retinopathy grading. The experimental results validate the superiority of our BOLT for medical image classification, compared to ImageNet pretrained weights and state-of-the-art self-supervised learning approaches.
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Domain adaptation aims to transfer the knowledge acquired by models trained on (data-rich) source domains to (low-resource) target domains, for which a popular method is invariant representation learning. While they have been studied extensively for classification and regression problems, how they apply to ranking problems, where the data and metrics have a list structure, is not well understood. Theoretically, we establish a domain adaptation generalization bound for ranking under listwise metrics such as MRR and NDCG. The bound suggests an adaptation method via learning list-level domain-invariant feature representations, whose benefits are empirically demonstrated by unsupervised domain adaptation experiments on real-world ranking tasks, including passage reranking. A key message is that for domain adaptation, the representations should be analyzed at the same level at which the metric is computed, as we show that learning invariant representations at the list level is most effective for adaptation on ranking problems.
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The number of international benchmarking competitions is steadily increasing in various fields of machine learning (ML) research and practice. So far, however, little is known about the common practice as well as bottlenecks faced by the community in tackling the research questions posed. To shed light on the status quo of algorithm development in the specific field of biomedical imaging analysis, we designed an international survey that was issued to all participants of challenges conducted in conjunction with the IEEE ISBI 2021 and MICCAI 2021 conferences (80 competitions in total). The survey covered participants' expertise and working environments, their chosen strategies, as well as algorithm characteristics. A median of 72% challenge participants took part in the survey. According to our results, knowledge exchange was the primary incentive (70%) for participation, while the reception of prize money played only a minor role (16%). While a median of 80 working hours was spent on method development, a large portion of participants stated that they did not have enough time for method development (32%). 25% perceived the infrastructure to be a bottleneck. Overall, 94% of all solutions were deep learning-based. Of these, 84% were based on standard architectures. 43% of the respondents reported that the data samples (e.g., images) were too large to be processed at once. This was most commonly addressed by patch-based training (69%), downsampling (37%), and solving 3D analysis tasks as a series of 2D tasks. K-fold cross-validation on the training set was performed by only 37% of the participants and only 50% of the participants performed ensembling based on multiple identical models (61%) or heterogeneous models (39%). 48% of the respondents applied postprocessing steps.
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Large language models (LLMs) have shown impressive results across a variety of tasks while requiring little or no direct supervision. Further, there is mounting evidence that LLMs may have potential in information-seeking scenarios. We believe the ability of an LLM to attribute the text that it generates is likely to be crucial for both system developers and users in this setting. We propose and study Attributed QA as a key first step in the development of attributed LLMs. We develop a reproducable evaluation framework for the task, using human annotations as a gold standard and a correlated automatic metric that we show is suitable for development settings. We describe and benchmark a broad set of architectures for the task. Our contributions give some concrete answers to two key questions (How to measure attribution?, and How well do current state-of-the-art methods perform on attribution?), and give some hints as to how to address a third key question (How to build LLMs with attribution?).
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Generalist models, which are capable of performing diverse multi-modal tasks in a task-agnostic way within a single model, have been explored recently. Being, hopefully, an alternative to approaching general-purpose AI, existing generalist models are still at an early stage, where modality and task coverage is limited. To empower multi-modal task-scaling and speed up this line of research, we release a generalist model learning system, OFASys, built on top of a declarative task interface named multi-modal instruction. At the core of OFASys is the idea of decoupling multi-modal task representations from the underlying model implementations. In OFASys, a task involving multiple modalities can be defined declaratively even with just a single line of code. The system automatically generates task plans from such instructions for training and inference. It also facilitates multi-task training for diverse multi-modal workloads. As a starting point, we provide presets of 7 different modalities and 23 highly-diverse example tasks in OFASys, with which we also develop a first-in-kind, single model, OFA+, that can handle text, image, speech, video, and motion data. The single OFA+ model achieves 95% performance in average with only 16% parameters of 15 task-finetuned models, showcasing the performance reliability of multi-modal task-scaling provided by OFASys. Available at https://github.com/OFA-Sys/OFASys
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Computer vision and machine learning are playing an increasingly important role in computer-assisted diagnosis; however, the application of deep learning to medical imaging has challenges in data availability and data imbalance, and it is especially important that models for medical imaging are built to be trustworthy. Therefore, we propose TRUDLMIA, a trustworthy deep learning framework for medical image analysis, which adopts a modular design, leverages self-supervised pre-training, and utilizes a novel surrogate loss function. Experimental evaluations indicate that models generated from the framework are both trustworthy and high-performing. It is anticipated that the framework will support researchers and clinicians in advancing the use of deep learning for dealing with public health crises including COVID-19.
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Network structure evolves with time in the real world, and the discovery of changing communities in dynamic networks is an important research topic that poses challenging tasks. Most existing methods assume that no significant change in the network occurs; namely, the difference between adjacent snapshots is slight. However, great change exists in the real world usually. The great change in the network will result in the community detection algorithms are difficulty obtaining valuable information from the previous snapshot, leading to negative transfer for the next time steps. This paper focuses on dynamic community detection with substantial changes by integrating higher-order knowledge from the previous snapshots to aid the subsequent snapshots. Moreover, to improve search efficiency, a higher-order knowledge transfer strategy is designed to determine first-order and higher-order knowledge by detecting the similarity of the adjacency matrix of snapshots. In this way, our proposal can better keep the advantages of previous community detection results and transfer them to the next task. We conduct the experiments on four real-world networks, including the networks with great or minor changes. Experimental results in the low-similarity datasets demonstrate that higher-order knowledge is more valuable than first-order knowledge when the network changes significantly and keeps the advantage even if handling the high-similarity datasets. Our proposal can also guide other dynamic optimization problems with great changes.
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近年来,在自学学习(SSL)方面取得了重大成功,这有助于各种下游任务。但是,攻击者可能会窃取此类SSL模型并将其商业化以获利,这对于保护其知识产权(IP)至关重要。大多数现有的IP保护解决方案都是为监督学习模型而设计的,不能直接使用,因为它们要求模型的下游任务和目标标签在水印嵌入过程中已知并获得,这在SSL的域中并非总是可以的。为了解决此类问题,尤其是在水印嵌入过程中下游任务多样化且未知时,我们提出了一种新型的黑盒水印解决方案,名为SSL-WM,以保护SSL模型的所有权。 SSL-WM将水印编码器的水印输入映射到不变的表示空间中,该空间会导致任何下游分类器产生预期的行为,从而允许检测到嵌入式水印。我们使用不同的SSL模型(包括基于对比度和基于生成的生成型)来评估许多任务,例如计算机视觉(CV)和自然语言处理(NLP)等许多任务。实验结果表明,SSL-WM可以有效地验证各种下游任务中被盗SSL模型的所有权。此外,SSL-WM对模型进行微调和修剪攻击非常强大。最后,SSL-WM还可以从评估的水印检测方法中逃避检测,从而证明了其在保护SSL模型IP时的有希望的应用。
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COBB角度估计的自动化方法对脊柱侧弯评估的需求很高。现有方法通常从地标估计计算COBB角度,或者简单地将低级任务(例如,地标检测和脊柱分段)与Cobb角度回归任务相结合,而无需完全互相探索彼此的好处。在这项研究中,我们提出了一个名为SEG4REG+的新型多任务框架,该框架共同优化了分割和回归网络。我们对彼此之间的本地和全球一致性和知识转移进行彻底研究。具体而言,我们提出了一个关注正规化模块,利用了从图像分段对的类激活图(CAM),以在回归网络中发现其他监督,并且CAM可以用作利益区域的增强门,以促进分段任务进而促进分段任务。 。同时,我们设计了一种新颖的三角一致性学习,以共同训练两个网络以进行全球优化。对公共AASCE挑战数据集进行的评估证明了每个模块的有效性以及我们的模型与最先进方法的卓越性能。
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可靠的导航系统在机器人技术和自动驾驶中具有广泛的应用。当前方法采用开环过程,将传感器输入直接转换为动作。但是,这些开环方案由于概括不佳而在处理复杂而动态的现实情况方面具有挑战性。在模仿人类导航的情况下,我们添加了一个推理过程,将动作转换回内部潜在状态,形成了两阶段的感知,决策和推理的封闭环路。首先,VAE增强的演示学习赋予了模型对基本导航规则的理解。然后,在RL增强交互学习中的两个双重过程彼此产生奖励反馈,并共同增强了避免障碍能力。推理模型可以实质上促进概括和鲁棒性,并促进算法将算法的部署到现实世界的机器人,而无需精心转移。实验表明,与最先进的方法相比,我们的方法更适合新型方案。
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